胸部肿瘤患者外周血microRNA表达与急性放射性肺炎相关性研究

Primary Study of Correlation Between Peripheral microRNA Expression and Acute Radiation Pneumonitis for Thoracic Cancer Patient

  • 摘要: 为探讨胸部肿瘤患者放疗前后外周血微小RNA(microRNA, miR)表达的改变以及与急性放射性肺炎发生的相关性,选取了18例2019.04.24—2020.05.18日在苏州大学附属第二医院接受放疗的食管癌或胸腺瘤患者(其中4例因不能按要求留存标本而出组,1例因个人原因暂停治疗而出组,实际13例)。分别收集患者3个剂量点(0、20~30、40~50 Gy)的外周血标本,采用miR芯片检测,并通过T检验、相关分析筛选出潜在miR,同时应用生物信息分析预测miR的下游靶基因。miR芯片共检测出14个在0 Gy和20~30 Gy组显著差异表达的miR。其中,有3个miR在20~30 Gy和40~50 Gy放疗后均差异表达,并呈剂量依赖性。同时,2例发生≥2度放射性肺炎患者的11个miR的表达水平明显大于其余11例患者。取上述结果的交集,发现hsa-miR-19b-3p和hsa-miR-933的表达呈剂量依赖性,同时发生≥2度放射性肺炎患者的hsa-miR-19b-3p和hsa-miR-933的表达明显大于未发生者。生物信息分析预测出差异表达miR的靶基因功能主要包括棕榈先转移活性、泛素连接酶复合体、谷氨酸盐受体、Hedgehog、cGMP-PKG以及AGE-RAGE等信号通路。胸部肿瘤患者放疗后外周血miR表达发生显著改变,其中hsa-miR-19b-3p和hsa-miR-933的表达水平呈剂量依赖性,并能区分是否发生放射性肺炎,为临床放射性肺炎的早期诊断提供新思路和方法。

     

    Abstract: To investigate the relationship between peripheral microRNA (miR) expression of thoracic cancer patients and radiation pneumonitis (RP) during radiotherapy, a total of 18 thoracic cancer patients received radiotherapy in The Second Affiliated Hospital of Soochow University from April 2019 to May 2020 were enrolled. 4 patients were excluded due to the failure of obtaining samples, and 1 patient was excluded for not completing radiotherapy. Therefore, the total of 13 patients was included in this study. Serum samples were collected before and after radiotherapy with 20-30 Gy and 40-50 Gy. The total RNA was extracted and the expression of miR was detected by Agilent Human miR microarray. Then, differentially expressed miRs were identified via T-test and correlation analysis. Next, target miRs of these differentially expressed miRs were predicted by searching miRDB and miRWalk databases, and conducting gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) analysis. 14 differentially expressed miRs were detected after 20-30 Gy radiotherapy, with 2 up-regulated and 12 down-regulated. Among them, 3 miRs were differentially expressed in a dose-dependent manner after 20-30 Gy and 40-50 Gy radiotherapy. On the other hand, for these 14 differentially expressed miRs, 11 of them change more significantly in patients with ≥2 degree radiation pneumonitis than those without. Further, hsa-miR-19b-3p and hsa-miR-933 differentially express in a dosedependent manner after radiotherapy, and changes more significantly in patients with ≥2 degree radiation pneumonitis than those without. Therefore, hsa-miR-19b-3p and hsa-miR-933 can be identified as potential biomarkers. Finally, target genes of these differentially expressed miRs are predicted to be primarily enriched in the palmitoyltransterase activity, ubiquitin ligase complex, glutamate, Hedgehog, cGMP-PKG and AGE-RAGE signal pathway. The expression of peripheral miR of thoracic cancer patients changes significantly after radiotherapy, and hsa-miR-19b-3p and hsa-miR-933 are screened as potential biomarkers for the prediction and evaluation of RP.

     

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